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1_6_COMMA_ANALYSIS_SUMMARY.md
2dgraph.md
AGENTS.md
AI_STARTUP_PARAMETERS.md
ANALYSIS_COMPLETE_REPORT.md
CODE_OF_ETHICS.md
DATA_ANALYSIS_COMPLETED.md
DEPLOYMENT_FRED_STURM.md
DEPLOYMENT_FTP_ONLY.md
DEPLOYMENT_GUIDE_FRED_WORK.md
DEPLOYMENT_NO_SSH.md
DEPLOYMENT_SIMPLE.md
DOCUMENTATION_MAINTENANCE.md
GREEK_SCALES_COMPLETE.md
GREEK_SCALES_IMPORT.md
INITIALIZE_ALL_SLUGS.md
MARKDOWN_EXTENSIONS_DEMO.md
MARKDOWN_REFERENCE.md
MIGRATION_TO_SCL.md
PATTERNS.md
PRODUCTIVITY_SESSION_SUMMARY.md
README.md
REFERENCE_SYSTEM.md
REFERENCE_SYSTEM_SUMMARY.md
SESSION_COMPLETE.md
SIMILARITY.md
SLUG_SYSTEM_USAGE.md
SYNC_PRODUCTION_DB.md
VALIDATION_PROOF.md
_tuning/README.md
api_collections_README.md
api_historical_status_README.md
api_pattern_groups_README.md
deep-research-2-summary.md
deep-research-report.md
deep-research-report2.md
docs/AI_ROLE_ARCHITECT.md
docs/AI_ROLE_IMPLEMENTOR.md
docs/AI_SCHOLAR.md
docs/AI_SCRIPT_ARCHITECTURE_AND_SUPERVISION.md
docs/Comprehensive Multi-Disciplinary Profiles for the 24 Musical Keys.md
docs/LOCALHOST_DATA_ROUTING_ARCHITECTURE.md
docs/MARKDOWN_GRAPH_SYNTAX.md
docs/PIPELINE_CONFIG_CONTRACT.md
docs/TEMPERAMENT_CLASSIFICATION.md
docs/V3_90_CONFIDENCE_EXECUTION_PLAN.md
docs/V3_API_ALLOWLIST_CACHE_POLICY.md
docs/V3_CUTOVER_CHECKLIST.md
docs/V3_DIRECTORY_LAYOUT.md
docs/V3_ENDPOINT_COMPAT_MATRIX.md
docs/V3_ENDPOINT_MAPPING.md
docs/V3_ERROR_POLICY.md
docs/V3_FALLBACK_LOGGING_SPEC.md
docs/V3_HANDOFF_SUMMARY.md
docs/V3_LOCALHOST_LOW_RISK_PLAN.md
docs/V3_LOCALHOST_TEST_PLAN.md
docs/V3_PROVIDER_INTERFACE_SPEC.md
docs/V3_RISKS_AND_MITIGATIONS.md
docs/V3_TASK_DEPENDENCIES.md
docs/V3_TOP_PAGES_REQUIREMENTS.md
docs/checklists/AI_PIPELINE_SIGNOFF_CHECKLIST.md
docs/dissertation_sketch/00_Abstract.md
docs/dissertation_sketch/01_Objective_and_Questions.md
docs/dissertation_sketch/02_Data_and_Methods.md
docs/dissertation_sketch/03_State_Beat_Ranges.md
docs/dissertation_sketch/04_Beat_Model_and_Scoring.md
docs/dissertation_sketch/05_State_to_Key_Recommendations.md
docs/dissertation_sketch/06_Temperament_Case_Studies.md
docs/dissertation_sketch/07_Limitations_and_Validation.md
docs/dissertation_sketch/08_Next_Experiments.md
docs/dissertation_sketch/10_C_Major_Emotion_Matrix_Effectiveness_Narrative.md
docs/dissertation_sketch/11_Temperament_Emotion_Narratives.md
docs/dissertation_sketch/12_Exhibition_Temperament_Emotion_Gallery.md
docs/dissertation_sketch/13_Key_Expectation_Map_Kirnberger_vs_Fisher.md
docs/dissertation_sketch/14_Key_Expectation_Map_v2_Combined.md
docs/dissertation_sketch/15_Key_Expectations_Top10_TopX.md
docs/dissertation_sketch/emotion_matrix_c_major_24x24.md
docs/dissertation_sketch/index.md
docs/file_update_suggestions.md
docs/labs_p_value_page.md
docs/runbooks/AI_STARTUP_OPERATOR_RUNBOOK.md
murray.md
pianohistory.md
reports/zarlino_extraction_status.md
resources/Colloquium_Sturm.md
resources/Path_Forward.md
resources/Proposed_Changes.md
resources/misc/index.md
resources/misc/recipes/abuelita_chocolate_curd.md
resources/murray.md
resources/murray_text/index.md
resources/murray_text/murray-glossary.md
resources/murray_text/murray-index.md
resources/murray_text/murray_text_00_preface.md
resources/murray_text/murray_text_01_history.md
resources/murray_text/murray_text_02_greek.md
resources/murray_text/murray_text_03_meantone.md
resources/murray_text/murray_text_04_equal.md
resources/murray_text/murray_text_05_just_intonation.md
resources/murray_text/murray_text_06_multiple_division.md
resources/murray_text/murray_text_07_irregular.md
resources/murray_text/murray_text_08_practice.md
resources/reader_crosslinks_and_references.md
resources/schubart_voice/index.md
resources/schubart_voice/schubart_voice.md
resources/sturm_text/CAPABILITIES_SUMMARY.md
resources/sturm_text/FRED_EXECUTIVE_SUMMARY.md
resources/sturm_text/INTEGRATED_ARTICLE.md
resources/sturm_text/INTEGRATION_COMPLETE.md
resources/sturm_text/INTEGRATION_PROPOSAL.md
resources/sturm_text/NEW_CAPABILITIES_PROPOSAL.md
resources/sturm_text/SUMMARY.md
resources/sturm_text/index.md
resources/sturm_text/sturm_text_01_introduction.md
resources/sturm_text/sturm_text_02_pure_thirds.md
resources/sturm_text/sturm_text_03_dirty_thirds.md
resources/sturm_text/sturm_text_04_modified_meantone.md
resources/sturm_text/sturm_text_05_german_irregular.md
resources/sturm_text/sturm_text_06_equal_temperament.md
resources/sturm_text/sturm_text_07_england.md
resources/sturm_text/sturm_text_08_jorgensen.md
resources/sturm_text/sturm_text_09_practical.md
scripts/AGENTS.md
scripts/API_IMPLEMENTATION_SUMMARY.md
scripts/README_ANALYSIS.md
scripts/README_BATCH_THUMBNAILS.md
scripts/README_FRED_SCRIPTS.md
scripts/README_GENERATE_EXAMPLES.md
scripts/README_SIMILARITY_PROOF.md
scripts/README_our_list_classifier.md
shared/engine4/_lib/colormusik-master/README.md
shared/engine4/_lib/sql-formatter-master/README.md
shared/engine4/tonejs-instruments/LICENSE.md
shared/engine4/tonejs-instruments/README.md
tech/TEST_VERIFICATION.md
temperament/projects/ASKWILLIS.md
temperament/projects/IMPLEMENTATION_COMPLETE.md
temperament/projects/PLAN_IMPLEMENTATION_COMPLETE.md
temperament/projects/REVIEW_READY.md
todo/001.md
todo/002.md
todo/003.md
todo/004.md
todo/005.md
todo/006.md
todo/007.md
todo/008.md
todo/009.md
todo/010.md
todo/011.md
todo/012.md
top-x-temperaments-explained.md
tse/AGENTS.md
tse/API_REFERENCE.md
tse/API_TEMPERAMENT_SIMILARITY_DOCUMENTATION.md
tse/CHANGELOG.md
tse/CONTRIBUTING.md
tse/DARK_COUNTERPART_PROPOSAL_PARAMETERIZED_WEIGHTING.md
tse/DARK_COUNTERPART_SUMMARY.md
tse/DARK_COUNTERPART_TEST_PLAN.md
tse/DARK_COUNTERPART_TODO.md
tse/DATASETS.md
tse/EXAMPLES.md
tse/FINAL_COMPLETION_REPORT.md
tse/IMPLEMENTATION_COMPLETE.md
tse/IMPLEMENTATION_SUMMARY.md
tse/INTEGRATION_OPPORTUNITIES.md
tse/INTEGRATION_PLAN.md
tse/LEARNING_PATH.md
tse/PERFORMANCE.md
tse/PLAN_VERIFICATION.md
tse/QUICKSTART.md
tse/REMAINING_TASKS.md
tse/REVIEW_READY.md
tse/SCRIPT_EXECUTION_COMPARISON.md
tse/SOCRATIC_DIALOG.md
tse/TSE_Dark_Counterpart_Analysis.md
tse/TSE_IMPROVEMENTS_SUMMARY.md
tse/TSE_LIMITATIONS.md
tse/TSE_METHODOLOGY.md
tse/TSE_PROOF_REPORT.md
tse/TUTORIAL.md
tse/Temperament_Similarity_Analysis.md
tse/api/README.md
tse/docs/METHODOLOGY_ASSUMPTIONS.md
tse/socratic_exchange_log_20251130_111025.md
tse/socratic_exchange_log_20251130_111724.md
tse/socratic_exchange_log_20251202_105008.md
tse/socratic_exchange_log_20251202_113029.md
tse/socratic_exchange_log_initial.md
useful_or_not.md
workflow/todo/001.md
workflow/todo/002.md
workflow/todo/003.md
workflow/todo/004.md
workflow/todo/005.md
workflow/todo/006.md
workflow/todo/007.md
workflow/todo/008.md
workflow/todo/009.md
workflow/todo/010.md
workflow/todo/011.md
workflow/todo/012.md
workflow/todo/013.md
workflow/todo/014.md
workflow/todo/015.md
workflow/todo/016.md
workflow/todo/017.md
workflow/todo/018.md
workflow/todo/019.md
workflow/todo/020.md
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