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010_DOCUMENTATION_MAINTENANCE.md
010_GREEK_SCALES_COMPLETE.md
010_GREEK_SCALES_IMPORT.md
010_INITIALIZE_ALL_SLUGS.md
010_README.md
010_REFERENCE_SYSTEM.md
010_REFERENCE_SYSTEM_SUMMARY.md
010_SLUG_SYSTEM_USAGE.md
010_api_collections_README.md
010_api_historical_status_README.md
010_api_pattern_groups_README.md
010_deep-research-2-summary.md
010_deep-research-report.md
010_deep-research-report2.md
010_murray.md
010_top-x-temperaments-explained.md
010_useful_or_not.md
020_CODE_OF_ETHICS.md
020_GOVERNANCE_INDEX.md
030_AGENTS.md
030_AI_STARTUP_PARAMETERS.md
030_AI_STARTUP_PROTOCOL.md
040_DOCUMENTATION_SYSTEM_PROOF.md
040_MARKDOWN_EXTENSIONS_DEMO.md
040_MARKDOWN_REFERENCE.md
1_6_COMMA_ANALYSIS_SUMMARY.md
230_ANALYSIS_COMPLETE_REPORT.md
230_DATA_ANALYSIS_COMPLETED.md
2dgraph.md
330_DEPLOYMENT_GUIDE_FRED_WORK.md
330_DEPLOYMENT_SIMPLE.md
330_SYNC_PRODUCTION_DB.md
430_PRODUCTIVITY_SESSION_SUMMARY.md
430_SESSION_COMPLETE.md
AGENTS.md
AI_STARTUP_PARAMETERS.md
AI_STARTUP_PROTOCOL.md
ANALYSIS_COMPLETE_REPORT.md
CODE_OF_ETHICS.md
DATA_ANALYSIS_COMPLETED.md
DEPLOYMENT_FRED_STURM.md
DEPLOYMENT_FTP_ONLY.md
DEPLOYMENT_GUIDE_FRED_WORK.md
DEPLOYMENT_NO_SSH.md
DEPLOYMENT_SIMPLE.md
DOCUMENTATION_MAINTENANCE.md
GOVERNANCE_INDEX.md
GREEK_SCALES_COMPLETE.md
GREEK_SCALES_IMPORT.md
INITIALIZE_ALL_SLUGS.md
MARKDOWN_EXTENSIONS_DEMO.md
MARKDOWN_REFERENCE.md
MIGRATION_TO_SCL.md
PATTERNS.md
PRODUCTIVITY_SESSION_SUMMARY.md
README.md
REFERENCE_SYSTEM.md
REFERENCE_SYSTEM_SUMMARY.md
SESSION_COMPLETE.md
SIMILARITY.md
SLUG_SYSTEM_USAGE.md
SYNC_PRODUCTION_DB.md
VALIDATION_PROOF.md
_tuning/010_README.md
api_collections_README.md
api_historical_status_README.md
api_pattern_groups_README.md
archive/010_README.md
archive/510_fred_arlington_recital_email_2026.md
complete/010_020.md
complete/010_021.md
deep-research-2-summary.md
deep-research-report.md
deep-research-report2.md
docs/010_file_update_suggestions.md
docs/030_AI_ROLE_ARCHITECT.md
docs/030_AI_ROLE_IMPLEMENTOR.md
docs/030_AI_SCHOLAR.md
docs/030_AI_SCRIPT_ARCHITECTURE_AND_SUPERVISION.md
docs/040_MARKDOWN_GRAPH_SYNTAX.md
docs/050_SUBAGENT_ROSTER.md
docs/110_TEMPERAMENT_CLASSIFICATION.md
docs/220_labs_p_value_page.md
docs/310_V3_90_CONFIDENCE_EXECUTION_PLAN.md
docs/310_V3_API_ALLOWLIST_CACHE_POLICY.md
docs/310_V3_DIRECTORY_LAYOUT.md
docs/310_V3_ENDPOINT_COMPAT_MATRIX.md
docs/310_V3_ENDPOINT_MAPPING.md
docs/310_V3_ERROR_POLICY.md
docs/310_V3_FALLBACK_LOGGING_SPEC.md
docs/310_V3_HANDOFF_SUMMARY.md
docs/310_V3_LOCALHOST_LOW_RISK_PLAN.md
docs/310_V3_LOCALHOST_TEST_PLAN.md
docs/310_V3_PROVIDER_INTERFACE_SPEC.md
docs/310_V3_RISKS_AND_MITIGATIONS.md
docs/310_V3_TASK_DEPENDENCIES.md
docs/310_V3_TOP_PAGES_REQUIREMENTS.md
docs/340_LOCALHOST_DATA_ROUTING_ARCHITECTURE.md
docs/340_PIPELINE_CONFIG_CONTRACT.md
docs/420_V3_CUTOVER_CHECKLIST.md
docs/530_Comprehensive_Multi-Disciplinary_Profiles.md
docs/checklists/420_AI_PIPELINE_SIGNOFF_CHECKLIST.md
docs/checklists/420_EMOTION_CLAIM_QUALITY_CHECKLIST.md
docs/dissertation_sketch/610_00_Abstract.md
docs/dissertation_sketch/610_01_Objective_and_Questions.md
docs/dissertation_sketch/610_02_Data_and_Methods.md
docs/dissertation_sketch/610_03_State_Beat_Ranges.md
docs/dissertation_sketch/610_04_Beat_Model_and_Scoring.md
docs/dissertation_sketch/610_05_State_to_Key_Recommendations.md
docs/dissertation_sketch/610_06_Temperament_Case_Studies.md
docs/dissertation_sketch/610_07_Limitations_and_Validation.md
docs/dissertation_sketch/610_08_Next_Experiments.md
docs/dissertation_sketch/610_09_Psychoacoustics_of_Beating.md
docs/dissertation_sketch/610_10_C_Major_Emotion_Matrix_Effectiveness_Narrative.md
docs/dissertation_sketch/610_11_Temperament_Emotion_Narratives.md
docs/dissertation_sketch/610_12_Exhibition_Temperament_Emotion_Gallery.md
docs/dissertation_sketch/610_13_Key_Expectation_Map_Kirnberger_vs_Fisher.md
docs/dissertation_sketch/610_14_Key_Expectation_Map_v2_Combined.md
docs/dissertation_sketch/610_15_Key_Expectations_Top10_TopX.md
docs/dissertation_sketch/610_16_Historical_Background_Temperament.md
docs/dissertation_sketch/610_17_Emotion_Taxonomy.md
docs/dissertation_sketch/610_18_Literature_Review.md
docs/dissertation_sketch/610_19_Formula_Derivation.md
docs/dissertation_sketch/610_20_Zone_Calibration.md
docs/dissertation_sketch/610_21_Valence_Model.md
docs/dissertation_sketch/610_22_Full_109_Temperament_Coverage.md
docs/dissertation_sketch/610_23_Bimodal_Meantone_Analysis.md
docs/dissertation_sketch/610_24_ET_Critique.md
docs/dissertation_sketch/610_24x24_v2_experiment_plan.md
docs/dissertation_sketch/610_25_Kirnberger_Finding.md
docs/dissertation_sketch/610_26_Historical_Validation.md
docs/dissertation_sketch/610_27_Compositional_Implications.md
docs/dissertation_sketch/610_28_Conclusion.md
docs/dissertation_sketch/610_AUDIT_SIGNOFF.md
docs/dissertation_sketch/610_A_Full_Zone_Maps.md
docs/dissertation_sketch/610_B_Emotion_Taxonomy_Reference.md
docs/dissertation_sketch/610_C_Historical_Key_Characters.md
docs/dissertation_sketch/610_DISSERTATION_PLAN.md
docs/dissertation_sketch/610_DISSERTATION_WRITER.md
docs/dissertation_sketch/610_D_Mathematical_Reference.md
docs/dissertation_sketch/610_ENDNOTES.md
docs/dissertation_sketch/610_E_Data_Source_Notes.md
docs/dissertation_sketch/610_INVENTORY.md
docs/dissertation_sketch/610_SELF_CRITIQUE.md
docs/dissertation_sketch/610_SHOWCASE_ARCHITECTURE.md
docs/dissertation_sketch/610_STYLE_GUIDE.md
docs/dissertation_sketch/610_emotion_matrix_c_major_24x24.md
docs/dissertation_sketch/610_index.md
docs/dissertation_sketch/610_listening_cross_validation.md
docs/dissertation_sketch/610_multi_tonic_matrices.md
docs/dissertation_sketch/610_offset_dominance_audit.md
docs/dissertation_sketch/610_offset_fingerprint_report.md
docs/dissertation_sketch/610_ranking_report.md
docs/dissertation_sketch/610_state_residual_metrics.md
docs/runbooks/030_AI_STARTUP_OPERATOR_RUNBOOK.md
murray.md
pianohistory.md
reports/zarlino_extraction_status.md
resources/Colloquium_Sturm.md
resources/Path_Forward.md
resources/Proposed_Changes.md
resources/misc/index.md
resources/misc/recipes/abuelita_chocolate_curd.md
resources/murray.md
resources/murray_text/index.md
resources/murray_text/murray-glossary.md
resources/murray_text/murray-index.md
resources/murray_text/murray_text_00_preface.md
resources/murray_text/murray_text_01_history.md
resources/murray_text/murray_text_02_greek.md
resources/murray_text/murray_text_03_meantone.md
resources/murray_text/murray_text_04_equal.md
resources/murray_text/murray_text_05_just_intonation.md
resources/murray_text/murray_text_06_multiple_division.md
resources/murray_text/murray_text_07_irregular.md
resources/murray_text/murray_text_08_practice.md
resources/reader_crosslinks_and_references.md
resources/schubart_voice/index.md
resources/schubart_voice/schubart_voice.md
resources/sturm_text/CAPABILITIES_SUMMARY.md
resources/sturm_text/FRED_EXECUTIVE_SUMMARY.md
resources/sturm_text/INTEGRATED_ARTICLE.md
resources/sturm_text/INTEGRATION_COMPLETE.md
resources/sturm_text/INTEGRATION_PROPOSAL.md
resources/sturm_text/NEW_CAPABILITIES_PROPOSAL.md
resources/sturm_text/SUMMARY.md
resources/sturm_text/index.md
resources/sturm_text/sturm_text_01_introduction.md
resources/sturm_text/sturm_text_02_pure_thirds.md
resources/sturm_text/sturm_text_03_dirty_thirds.md
resources/sturm_text/sturm_text_04_modified_meantone.md
resources/sturm_text/sturm_text_05_german_irregular.md
resources/sturm_text/sturm_text_06_equal_temperament.md
resources/sturm_text/sturm_text_07_england.md
resources/sturm_text/sturm_text_08_jorgensen.md
resources/sturm_text/sturm_text_09_practical.md
scripts/AGENTS.md
scripts/API_IMPLEMENTATION_SUMMARY.md
scripts/README_ANALYSIS.md
scripts/README_BATCH_THUMBNAILS.md
scripts/README_FRED_SCRIPTS.md
scripts/README_GENERATE_EXAMPLES.md
scripts/README_SIMILARITY_PROOF.md
scripts/README_our_list_classifier.md
shared/engine4/_lib/colormusik-master/README.md
shared/engine4/_lib/sql-formatter-master/README.md
shared/engine4/tonejs-instruments/LICENSE.md
shared/engine4/tonejs-instruments/README.md
sturm_arlington_recital/320_tension_heatmap_werckmeister.md
sturm_arlington_recital/330_recital_tension_scores.md
sturm_arlington_recital/410_PTG_ARLINGTON_EXPECTATIONS.md
sturm_arlington_recital/410_arlington_research_tasks.md
sturm_arlington_recital/420_ARLINGTON_HARMONIC_ANALYSIS.md
sturm_arlington_recital/420_expansion_plan.md
sturm_arlington_recital/610_ARLINGTON_RESEARCH_PURPOSE.md
sturm_arlington_recital/610_README_ARLINGTON_RESEARCH.md
sturm_arlington_recital/611_ARLINGTON_RESEARCH_CHAPTER_1.md
sturm_arlington_recital/612_ARLINGTON_RESEARCH_CHAPTER_2.md
sturm_arlington_recital/613_ARLINGTON_RESEARCH_CHAPTER_3.md
sturm_arlington_recital/614_ARLINGTON_RESEARCH_CHAPTER_4.md
sturm_arlington_recital/615_ARLINGTON_RESEARCH_CHAPTER_5.md
sturm_arlington_recital/616_ARLINGTON_RESEARCH_AFTERWARDS_SURVEY.md
sturm_arlington_recital/620_TENSION_MATRIX.md
tech/TEST_VERIFICATION.md
temperament/projects/ASKWILLIS.md
temperament/projects/IMPLEMENTATION_COMPLETE.md
temperament/projects/PLAN_IMPLEMENTATION_COMPLETE.md
temperament/projects/REVIEW_READY.md
todo/001.md
todo/002.md
todo/003.md
todo/004.md
todo/005.md
todo/006.md
todo/007.md
todo/008.md
todo/009.md
todo/010.md
todo/011.md
todo/012.md
top-x-temperaments-explained.md
tse/AGENTS.md
tse/API_REFERENCE.md
tse/API_TEMPERAMENT_SIMILARITY_DOCUMENTATION.md
tse/CHANGELOG.md
tse/CONTRIBUTING.md
tse/DARK_COUNTERPART_PROPOSAL_PARAMETERIZED_WEIGHTING.md
tse/DARK_COUNTERPART_SUMMARY.md
tse/DARK_COUNTERPART_TEST_PLAN.md
tse/DARK_COUNTERPART_TODO.md
tse/DATASETS.md
tse/EXAMPLES.md
tse/FINAL_COMPLETION_REPORT.md
tse/IMPLEMENTATION_COMPLETE.md
tse/IMPLEMENTATION_SUMMARY.md
tse/INTEGRATION_OPPORTUNITIES.md
tse/INTEGRATION_PLAN.md
tse/LEARNING_PATH.md
tse/PERFORMANCE.md
tse/PLAN_VERIFICATION.md
tse/QUICKSTART.md
tse/REMAINING_TASKS.md
tse/REVIEW_READY.md
tse/SCRIPT_EXECUTION_COMPARISON.md
tse/SOCRATIC_DIALOG.md
tse/TSE_Dark_Counterpart_Analysis.md
tse/TSE_IMPROVEMENTS_SUMMARY.md
tse/TSE_LIMITATIONS.md
tse/TSE_METHODOLOGY.md
tse/TSE_PROOF_REPORT.md
tse/TUTORIAL.md
tse/Temperament_Similarity_Analysis.md
tse/api/README.md
tse/docs/METHODOLOGY_ASSUMPTIONS.md
tse/socratic_exchange_log_20251130_111025.md
tse/socratic_exchange_log_20251130_111724.md
tse/socratic_exchange_log_20251202_105008.md
tse/socratic_exchange_log_20251202_113029.md
tse/socratic_exchange_log_initial.md
useful_or_not.md
workflow/todo/001.md
workflow/todo/002.md
workflow/todo/003.md
workflow/todo/004.md
workflow/todo/005.md
workflow/todo/006.md
workflow/todo/007.md
workflow/todo/008.md
workflow/todo/009.md
workflow/todo/010.md
workflow/todo/011.md
workflow/todo/012.md
workflow/todo/013.md
workflow/todo/014.md
workflow/todo/015.md
workflow/todo/016.md
workflow/todo/017.md
workflow/todo/018.md
workflow/todo/019.md
workflow/todo/020.md
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